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Data last updated	September 30, 2026
Metadata last updated	October 5, 2026
Created	September 30, 2026
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Description	A dataset from the National Public Health Laboratory, a database of tracing studies on the results of tests and sequencing carried out by SARS-CoV-2. The dataset consists of three tables: 1. SARS-CoV-2 PCR and antigen tests have been performed in humans; 2. Sars-cov-2 report on the results of the Nextclade sequencing; 3. Sars-cov-2 report on the results of the Pangolin sequencing. Data provider means the National Public Health Care Laboratory. Data shall be collected from 1 November 2022.
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License	Creative Commons Attribution 4.0 International
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Title	Sars-cov-2 virus sequencing data (nextclade_ataskaita)
First field	DSR000001
Access URL	https://api.dataportal.gov.lt/namespaces/195551983/tables/nextclade_ataskaita/query
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Byte size	13018100
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Download URL	https://api.dataportal.gov.lt/namespaces/195551983/tables/nextclade_ataskaita/query
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Language	English Lithuanian
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Media type	json
Modification date	September 1, 2026
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Release date	September 22, 2025
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Spatial resolution
Status	Completed
Temporal resolution
Table schema	{"schema_type":"csvw","x-schemaVersion":"1.1","x-columnsCount":97,"tableSchema":{"columns":[{"name":"meg_id","titles":{"lt":"Mėginio identifikacinis numeris","en":"Sample identification number"},"datatype":"string","x-order":1,"x-filterType":"TEXT"},{"name":"kladas","titles":{"lt":"Priskirtas kladas","en":"Assigned clade"},"datatype":"string","x-order":2,"x-filterType":"CATEGORY","x-enum":[{"tag":"21L"},{"tag":"22A"},{"tag":"22B"},{"tag":"22D"},{"tag":"22E"},{"tag":"22F"},{"tag":"23A"},{"tag":"23B"},{"tag":"23C"},{"tag":"23D"},{"tag":"23E"},{"tag":"23F"},{"tag":"23G"},{"tag":"23H"},{"tag":"23I"},{"tag":"24A"},{"tag":"24B"},{"tag":"24C"},{"tag":"24E"},{"tag":"24F"},{"tag":"24H"},{"tag":"25A"},{"tag":"recombinant"}]},{"name":"nextstrain_kladas","titles":{"lt":"Priskirtas kladas pagal Nextstrain programinę įrangą","en":"Clade assigned according to Nextstrain software"},"datatype":"string","x-order":3,"x-filterType":"CATEGORY","x-enum":[{"tag":"21L"},{"tag":"22A"},{"tag":"22B"},{"tag":"22D"},{"tag":"22E"},{"tag":"22F"},{"tag":"23A"},{"tag":"23B"},{"tag":"23C"},{"tag":"23D"},{"tag":"23E"},{"tag":"23F"},{"tag":"23G"},{"tag":"23H"},{"tag":"23I"},{"tag":"24A"},{"tag":"24B"},{"tag":"24C"},{"tag":"24E"},{"tag":"24F"},{"tag":"24H"},{"tag":"25A"},{"tag":"recombinant"}]},{"name":"pso_kladas","titles":{"lt":"Priskirtas kladas pagal Pasaulinę sveikatos organizaciją","en":"Clade assigned according to the World Health Organization"},"datatype":"string","x-order":4,"x-filterType":"CATEGORY","x-enum":[{"tag":"Omicron"},{"tag":"recombinant"}]},{"name":"filog_linija","titles":{"lt":"Pilnas filogenetinės linijos pavadinimas","en":"Full name of the phylogenetic lineage"},"datatype":"string","x-order":5,"x-filterType":"TEXT"},{"name":"sutrump_filog_linija","titles":{"lt":"Sutrumpintas filogenetinės linijos pavadinimas","en":"Abbreviated name of the phylogenetic lineage"},"datatype":"string","x-order":6,"x-filterType":"TEXT"},{"name":"klado_padetis","titles":{"lt":"Padėtis kladogramoje arba filogenetiniame medyje","en":"Position in the cladogram or phylogenetic tree"},"datatype":"string","x-order":7,"x-filterType":"CATEGORY","x-enum":[{"tag":"21L (BA.2)"},{"tag":"22A (BA.4)"},{"tag":"22B (BA.5)"},{"tag":"22D (BA.2.75)"},{"tag":"22E (BQ.1)"},{"tag":"22F (XBB)"},{"tag":"23A (XBB.1.5)"},{"tag":"23B (XBB.1.16)"},{"tag":"23C (CH.1.1)"},{"tag":"23D (XBB.1.9)"},{"tag":"23E (XBB.2.3)"},{"tag":"23F (EG.5.1)"},{"tag":"23G (XBB.1.5.70)"},{"tag":"23H (HK.3)"},{"tag":"23I (BA.2.86)"},{"tag":"24A (JN.1)"},{"tag":"24B (JN.1.11.1)"},{"tag":"24C (KP.3)"},{"tag":"24E (KP.3.1.1)"},{"tag":"24F (XEC)"},{"tag":"24H (LF.7)"},{"tag":"25A (LP.8.1)"},{"tag":"recombinant"}]},{"name":"kokybes_balas","titles":{"lt":"Bendras kokybės kontrolės balas","en":"Overall quality control score"},"datatype":"double","x-order":8,"x-filterType":"RANGE","x-range":{"min":0.0,"max":7842.242606}},{"name":"kokybes_statusas","titles":{"lt":"Bendras kokybės kontrolės statusas","en":"Overall quality control status"},"datatype":"string","x-order":9,"x-filterType":"CATEGORY","x-enum":[{"tag":"bad"},{"tag":"good"},{"tag":"mediocre"}]},{"name":"viso_nk_pakaitu","titles":{"lt":"Visuminis/bendras pakaitų kiekis nukleotidinėje sekoje","en":"Total/overall number of substitutions in the nucleotide sequence"},"datatype":"long","x-order":10,"x-filterType":"RANGE","x-range":{"min":8.0,"max":137.0}},{"name":"viso_nk_pakaitu_sar","titles":{"lt":"Sąrašas aptiktų nukleotidų sekų pakeitimų","en":"List of detected nucleotide sequence substitutions"},"datatype":"string","x-order":11,"x-filterType":"TEXT"},{"name":"viso_nk_iskr","titles":{"lt":"Visuminis/bendras iškritų kiekis nukleotidinėje sekoje","en":"Total/overall number of deletions in the nucleotide sequence"},"datatype":"long","x-order":12,"x-filterType":"RANGE","x-range":{"min":14.0,"max":173.0}},{"name":"viso_nk_iskr_sar","titles":{"lt":"Sąrašas aptiktų nukleotidų iškritų","en":"List of detected nucleotide deletions"},"datatype":"string","x-order":13,"x-filterType":"TEXT"},{"name":"viso_nk_inser","titles":{"lt":"Visuminis/bendras insercijų kiekis nukleotidinėje sekoje","en":"Total/overall number of insertions in the nucleotide sequence"},"datatype":"long","x-order":14,"x-filterType":"RANGE","x-range":{"min":0.0,"max":68.0}},{"name":"viso_nk_inser_sar","titles":{"lt":"Sąrašas aptiktų nukleotidų insercijų","en":"List of detected nucleotide insertions"},"datatype":"string","x-order":15,"x-filterType":"CATEGORY","x-enum":[{"tag":"10162:TGTGTTCCTTTTTGTTGCTGC"},{"tag":"10189:TTTTTGTTAAATAAAGAAATGTA,22615:AATACTGCGTCTTGGTTCACCGCTCTCACTCAACATG"},{"tag":"10197:TAGTGTGTAAAACTTGTGGACAACAGCAGACAACCCTTAAGGGTGTAGAAG"},{"tag":"10387:T"},{"tag":"11551:GCTTATTATCTT"},{"tag":"18369:T"},{"tag":"1896:GGC"},{"tag":"20487:GCTGTGGGG"},{"tag":"21608:TCATGCCGCKKKT"},{"tag":"21608:TCATGCCGCTGT"},{"tag":"21608:TCATGCCGTTGT"},{"tag":"21610:ATGCCGCTGTTT"},{"tag":"21610:ATGCCGCTGTTT,28250:CTG"},{"tag":"22304:CAGATCTGA"},{"tag":"22615:GCTT"},{"tag":"23126:CTGTCCAACCTGAAGAAGAAT"},{"tag":"25701:CCCCCC"},{"tag":"26493:T"},{"tag":"26511:GAGCGCGGCCGG"},{"tag":"27037:TA"},{"tag":"27791:TT"},{"tag":"27821:GATTTCATCTAAACGAACAAACTTAAATGTCTGATAATGGACCCCAAAATCAGCGAAATGCACTCCGC"},{"tag":"28214:TT"},{"tag":"28214:TT,28253:WT"},{"tag":"28214:TTT"},{"tag":"28214:TTTT"},{"tag":"28214:TTTTTT"},{"tag":"28214:TTTTTTTT"},{"tag":"28214:TTTTTTTTT"},{"tag":"28241:T"},{"tag":"28250:CTG"},{"tag":"29007:GGACGTGGG"},{"tag":"29389:AAG"},{"tag":"29563:TA"},{"tag":"29662:AATCTCACATAGCAATCTTTAATC"},{"tag":"3672:GCCG,20540:TGCT"},{"tag":"7202:GTGTGTAAAACTTGTGGACAACAGCAGACAACCCTTAAGGGTGTAGAAGCTGTTATGTA"},{"tag":"76:AAATATTATATTAG"}]},{"name":"viso_nk_trukstamu","titles":{"lt":"Visuminis/bendras trūkstamų nukleotidų kiekis","en":"Total/overall number of missing nucleotides"},"datatype":"long","x-order":16,"x-filterType":"RANGE","x-range":{"min":0.0,"max":21560.0}},{"name":"viso_nusk_posl","titles":{"lt":"Sąrašas aptiktų rėmelio poslinkio pokyčių","en":"List of detected frameshift changes"},"datatype":"long","x-order":17,"x-filterType":"RANGE","x-range":{"min":0.0,"max":2.0}},{"name":"viso_nusk_posl_sar","titles":{"lt":"Visuminis/bendras skaitymo rėmelio poslinkis","en":"Total/overall reading frame 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substitutions"},"datatype":"string","x-order":21,"x-filterType":"TEXT"},{"name":"viso_ar_iskr","titles":{"lt":"Visuminis/bendras aminorūgščių iškritų kiekis sekoje","en":"Total/overall number of amino acid deletions in the sequence"},"datatype":"long","x-order":22,"x-filterType":"RANGE","x-range":{"min":5.0,"max":52.0}},{"name":"viso_ar_iskr_sar","titles":{"lt":"Sąrašas aptiktų aminorūgščių iškritų","en":"List of detected amino acid deletions"},"datatype":"string","x-order":23,"x-filterType":"TEXT"},{"name":"viso_ar_inser","titles":{"lt":"Visuminis/bendras aminorūgščių insercijų kiekis sekoje","en":"Total/overall number of amino acid insertions in the sequence"},"datatype":"long","x-order":24,"x-filterType":"RANGE","x-range":{"min":0.0,"max":2.0}},{"name":"viso_ar_inser_sar","titles":{"lt":"Sąrašas aptiktų aminorūgščių insercijų","en":"List of detected amino acid insertions"},"datatype":"string","x-order":25,"x-filterType":"CATEGORY","x-enum":[{"tag":"N:245:DVG"},{"tag":"N:371:K"},{"tag":"ORF1a:2312:CV*NLWTTADNP*GCR"},{"tag":"ORF1a:3299:CVPFCCC"},{"tag":"ORF1a:3308:FLLN,S:351:NTASWFTALTQH"},{"tag":"ORF1a:3311:SV*NLWTTADNP*GCRX"},{"tag":"ORF1a:3762:AYYL"},{"tag":"ORF1a:544:A"},{"tag":"ORF1b:2340:AVG"},{"tag":"ORF1b:2357:N"},{"tag":"ORF3a:103:PP"},{"tag":"ORF7b:22:DFI*TNKLKCLIMDPKISEMHS"},{"tag":"ORF8:107:F"},{"tag":"ORF8:107:FF"},{"tag":"ORF8:107:FFF"},{"tag":"ORF8:107:X"},{"tag":"ORF8:108:FX"},{"tag":"ORF8:108:X"},{"tag":"ORF8:116:L"},{"tag":"ORF8:119:L"},{"tag":"ORF8:119:L,S:16:MPLF"},{"tag":"S:16:MPLF"},{"tag":"S:247:SDL"},{"tag":"S:352:X"},{"tag":"S:522:VQPEEES"}]},{"name":"viso_neidentifikuotu_ar","titles":{"lt":"Bendras kiekis neidentifikuotų aminorūgščių","en":"Total quantity of unidentified amino acids"},"datatype":"long","x-order":26,"x-filterType":"RANGE","x-range":{"min":0.0,"max":7270.0}},{"name":"nk_lygiavimo_ivertis","titles":{"lt":"Nukleotidų sekos lygiavimo įvertis","en":"Nucleotide sequence alignment score"},"datatype":"long","x-order":27,"x-filterType":"RANGE","x-range":{"min":68049.0,"max":89084.0}},{"name":"lygiavimo_sek_prad","titles":{"lt":"Nukleotidų lygiavimo sekos pradžia","en":"Start of the nucleotide alignment sequence"},"datatype":"long","x-order":28,"x-filterType":"RANGE","x-range":{"min":1.0,"max":354.0}},{"name":"lygiavimo_sek_pab","titles":{"lt":"Nukleotidų lygiavimo sekos pabaiga","en":"End of nucleotide alignment sequence"},"datatype":"long","x-order":29,"x-filterType":"RANGE","x-range":{"min":28772.0,"max":29903.0}},{"name":"padeng","titles":{"lt":"Nusekvenuotos sekos padengimas","en":"Coverage of the sequenced sequence"},"datatype":"double","x-order":30,"x-filterType":"RANGE","x-range":{"min":0.27900210681202553,"max":0.9989967561783099}},{"name":"kod_sek_padeng","titles":{"lt":"Koduojančių sekų padengimas","en":"Coverage of coding sequences"},"datatype":"string","x-order":31,"x-filterType":"TEXT"},{"name":"transform_seka","titles":{"lt":"Transformuota seka Požymis nurodantis ar seka buvo transformuota naudojant atvirkštinio komplemento operaciją prieš atliekant sekų lyginimą","en":"Transformed sequence Indicator specifying whether the sequence was transformed using the reverse complement operation before sequence alignment"},"datatype":"boolean","x-order":32},{"name":"viso_unik_nk_klad_transform_pakaitu","titles":{"lt":"Unikalių konkrečiam kladui priskiriamų reversinių pakeitimų mutacijų kiekis nukleotidų sekoje","en":"Number of unique reversion substitution mutations assigned to a specific clade in the nucleotide sequence"},"datatype":"long","x-order":33,"x-filterType":"RANGE","x-range":{"min":0.0,"max":15.0}},{"name":"unik_nk_klad_transform_pakaitu_sar","titles":{"lt":"Sąrašas unikalių konkrečiam kladui priskiriamų atvirkštinių mutacijų pakeitimų nukleotidų sekoje","en":"List of unique clade-specific reversion substitution mutations in the nucleotide sequence"},"datatype":"string","x-order":34,"x-filterType":"TEXT"},{"name":"viso_unik_nk_klad_pakaitu","titles":{"lt":"Pakeitimų mutacijų būdingų specifiniam kladui kiekis nukleotidų sekoje","en":"Number of substitution mutations characteristic of a specific clade in the nucleotide sequence"},"datatype":"long","x-order":35,"x-filterType":"RANGE","x-range":{"min":0.0,"max":18.0}},{"name":"unik_nk_klad_pakaitu_sar","titles":{"lt":"Sąrašas pakeitimų mutacijų būdingų specifiniam kladui nukleotidų sekoje","en":"List of substitution mutations characteristic of a specific clade in the nucleotide sequence"},"datatype":"string","x-order":36,"x-filterType":"TEXT"},{"name":"viso_ne_unik_nk_klad_pakaitu","titles":{"lt":"Pakeitimų mutacijų kurios nėra būdingos atitinkamam kladui ir nėra reversinės kiekis nukleotidų sekoje","en":"Number of substitution mutations that are not characteristic of the corresponding clade and are not reverse mutations in the nucleotide sequence"},"datatype":"long","x-order":37,"x-filterType":"RANGE","x-range":{"min":0.0,"max":17.0}},{"name":"ne_unik_nk_klad_pakaitu_sar","titles":{"lt":"Sąrašas pakeitimų mutacijų kurios nėra būdingos atitinkamam kladui ir nėra atvirkštinės nukleotidų sekoje","en":"List of substitution mutations that are not characteristic of the corresponding clade and are not reversions in the nucleotide sequence"},"datatype":"string","x-order":38,"x-filterType":"TEXT"},{"name":"viso_nk_klad_pakaitu","titles":{"lt":"Bendras kiekis unikalių mutacijų nukleotidų sekoje priskiriamų specifiniam kladui","en":"Total number of unique mutations in the nucleotide sequence assigned to a specific clade"},"datatype":"long","x-order":39,"x-filterType":"RANGE","x-range":{"min":0.0,"max":26.0}},{"name":"viso_unik_ar_klad_transform_pakaitu","titles":{"lt":"Unikalių konkrečiam kladui priskiriamų atvirkštinių pakaitinių mutacijų kiekis aminorūgščių sekoje","en":"Number of unique reverse substitution mutations assigned to a specific clade in the amino acid sequence"},"datatype":"long","x-order":40,"x-filterType":"RANGE","x-range":{"min":0.0,"max":13.0}},{"name":"unik_ar_klad_transform_pakaitu_sar","titles":{"lt":"Sąrašas unikalių konkrečiam kladui priskiriamų atvirkštinių pakeitimų mutacijų aminorūgščių sekoje","en":"List of unique clade-specific reversion substitution mutations in the amino acid sequence"},"datatype":"string","x-order":41,"x-filterType":"TEXT"},{"name":"viso_unik_ar_klad_pakaitu","titles":{"lt":"Pakaitinių mutacijų būdingų specifiniam kladui kiekis aminorūgščių sekoje","en":"Number of substitution mutations characteristic of a specific clade in the amino acid sequence"},"datatype":"long","x-order":42,"x-filterType":"RANGE","x-range":{"min":0.0,"max":0.0}},{"name":"unik_ar_klad_pakaitu_sar","titles":{"lt":"Sąrašas pakaitinių mutacijų būdingų specifiniam kladui aminorūgščių sekoje","en":"List of substitution mutations characteristic of a specific clade in the amino acid sequence"},"datatype":"string","x-order":43,"x-filterType":"CATEGORY","x-enum":[]},{"name":"viso_ne_unik_ar_klad_pakaitu","titles":{"lt":"Pakaitinių mutacijų kurios nėra būdingos atitinkamam kladui ir nėra atvirkštinės kiekis aminorūgščių sekoje","en":"Number of substitution mutations that are not characteristic of the corresponding clade and are not reverse mutations in the amino acid sequence"},"datatype":"long","x-order":44,"x-filterType":"RANGE","x-range":{"min":0.0,"max":15.0}},{"name":"ne_unik_ar_klad_pakaitu_sar","titles":{"lt":"Sąrašas pakaitinių mutacijų kurios nėra būdingos atitinkamam kladui ir nėra reversinės aminorūgščių sekoje","en":"List of substitution mutations that are not characteristic of the corresponding clade and are not reversions in the amino acid sequence"},"datatype":"string","x-order":45,"x-filterType":"TEXT"},{"name":"viso_ar_klad_pakaitu","titles":{"lt":"Bendras kiekis unikalių mutacijų aminorūgščių sekoje priskiriamų specifiniam kladui","en":"Total number of unique mutations in the amino acid sequence assigned to a specific clade"},"datatype":"long","x-order":46,"x-filterType":"RANGE","x-range":{"min":0.0,"max":18.0}},{"name":"trukstamu_nk_sar","titles":{"lt":"Sąrašas aptiktų trūkstamų nukleotidų","en":"List of detected missing nucleotides"},"datatype":"string","x-order":47,"x-filterType":"TEXT"},{"name":"sakos_pirmtk_pav","titles":{"lt":"Šakos pirmtako pavadinimas referenciniame filogenetiniame medyje","en":"name of the branch predecessor in the reference phylogenetic tree"},"datatype":"string","x-order":48,"x-filterType":"CATEGORY","x-enum":[{"tag":"NODE_0000199"},{"tag":"NODE_0000417"},{"tag":"NODE_0000506"},{"tag":"NODE_0000833"},{"tag":"NODE_0000892"},{"tag":"NODE_0000929"},{"tag":"NODE_0000938"},{"tag":"NODE_0001068"},{"tag":"NODE_0001134"},{"tag":"NODE_0001151"},{"tag":"NODE_0001444"},{"tag":"NODE_0001479"},{"tag":"NODE_0001506"},{"tag":"XAZ"},{"tag":"XBW"},{"tag":"XCZ"},{"tag":"XDB"},{"tag":"XDH"},{"tag":"internal_16e4"},{"tag":"internal_507f01a7"},{"tag":"internal_HK.3"},{"tag":"internal_XAY"},{"tag":"internal_XBB"},{"tag":"internal_XBB.1.9.2"},{"tag":"internal_XBB_1_5"},{"tag":"internal_XBF"},{"tag":"internal_XBK"},{"tag":"internal_XDA"},{"tag":"internal_XDQ"},{"tag":"internal_XDR"},{"tag":"internal_XEC"},{"tag":"internal_d7a2940b"},{"tag":"internal_db2d2241"}]},{"name":"sakos_pirmtk_nk_pakaitu_sar","titles":{"lt":"Aptiktų nukleotidų pakaitų sąrašas, palyginus su šakos pirmtako genotipu","en":"List of detected nucleotide substitutions compared with the genotype of the branch ancestor"},"datatype":"string","x-order":49,"x-filterType":"TEXT"},{"name":"sakos_pirmtk_nk_iskr_sar","titles":{"lt":"Aptiktų nukleotidų iškritų sąrašas, palyginus su šakos pirmtako genotipu","en":"List of detected nucleotide deletions compared with the genotype of the branch ancestor"},"datatype":"string","x-order":50,"x-filterType":"TEXT"},{"name":"sakos_pirmtk_ar_pakaitu_sar","titles":{"lt":"Aptiktų aminorūgščių pakaitų sąrašas, palyginus su šakos pirmtako genotipu","en":"List of detected amino acid substitutions compared with the branch ancestor genotype"},"datatype":"string","x-order":51,"x-filterType":"TEXT"},{"name":"sakos_pirmtk_ar_iskr_sar","titles":{"lt":"Aptiktų aminorūgščių iškritų sąrašas, palyginus su šakos pirmtako genotipu","en":"List of detected amino acid deletions compared with the branch ancestor genotype"},"datatype":"string","x-order":52,"x-filterType":"TEXT"},{"name":"pango_pirmtk_pav","titles":{"lt":"Pirmtako pavadinimas 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Identifier	odr000893
Other identifier	nextclade_ataskaita
distribution type	Web service/API
Access url	['https://api.dataportal.gov.lt/namespaces/195551983/tables/nextclade_ataskaita/query']
Access service	['DSR000001']
Byte size	13,018,100
Description translated	{'lt': 'Duomenų rinkinys iš Nacionalinės visuomenės sveikatos laboratorijos, sekoskaitos tyrimų duomenų bazės apie SARS-CoV-2 atliktus testų ir sekoskaitos rezultatus. Duomenų rinkinį sudaro trys lentelės: 1. Žmonėms atlikti SARS-CoV-2 PGR ir antigeno testai; 2. SARS-CoV-2 sekoskaitos Nextclade rezultatų ataskaita; 3. SARS-CoV-2 sekoskaitos Pangolin rezultatų ataskaita. Duomenų teikėjas – Nacionalinė visuomenės sveikatos priežiūros laboratorija. Duomenys kaupiami nuo 2022 m. lapkričio 1 d.', 'en': 'A dataset from the National Public Health Laboratory, a database of tracing studies on the results of tests and sequencing carried out by SARS-CoV-2. The dataset consists of three tables: 1. SARS-CoV-2 PCR and antigen tests have been performed in humans; 2. Sars-cov-2 report on the results of the Nextclade sequencing; 3. Sars-cov-2 report on the results of the Pangolin sequencing. Data provider means the National Public Health Care Laboratory. Data shall be collected from 1 November 2022.'}
Distribution status	completed
Distribution type	web_service
Download url	['https://api.dataportal.gov.lt/namespaces/195551983/tables/nextclade_ataskaita/query']
Has views	False
Id	odr000893
Identifier	odr000893
Language	['eng', 'lit']
Licence	cc_by_4_0
Media type	json
Modification date	2026-09-02T00:00:00+02:00
Other identifier	['nextclade_ataskaita']
Package id	od000893
Position	0
Release date	2025-09-23T00:00:00+02:00
Resource type	distribution
State	active
Table schema	{"schema_type":"csvw","x-schemaVersion":"1.1","x-columnsCount":97,"tableSchema":{"columns":[{"name":"meg_id","titles":{"lt":"Mėginio identifikacinis numeris","en":"Sample identification number"},"datatype":"string","x-order":1,"x-filterType":"TEXT"},{"name":"kladas","titles":{"lt":"Priskirtas kladas","en":"Assigned clade"},"datatype":"string","x-order":2,"x-filterType":"CATEGORY","x-enum":[{"tag":"21L"},{"tag":"22A"},{"tag":"22B"},{"tag":"22D"},{"tag":"22E"},{"tag":"22F"},{"tag":"23A"},{"tag":"23B"},{"tag":"23C"},{"tag":"23D"},{"tag":"23E"},{"tag":"23F"},{"tag":"23G"},{"tag":"23H"},{"tag":"23I"},{"tag":"24A"},{"tag":"24B"},{"tag":"24C"},{"tag":"24E"},{"tag":"24F"},{"tag":"24H"},{"tag":"25A"},{"tag":"recombinant"}]},{"name":"nextstrain_kladas","titles":{"lt":"Priskirtas kladas pagal Nextstrain programinę įrangą","en":"Clade assigned according to Nextstrain 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gretimų nežinomos aminorūgšties sričių sąrašas (aminorūgšties simbolis X)","en":"List of detected adjacent regions of unknown amino acids (amino acid symbol X)"},"datatype":"string","x-order":68,"x-filterType":"TEXT"},{"name":"dviprasmiu_nk_sar","titles":{"lt":"Aptiktų dviprasmių nukleotidų sąrašas (nukleotidų simboliai, kurie nėra A, C, G, T, N)","en":"List of detected ambiguous nucleotides (nucleotide symbols that are not A, C, G, T, N)"},"datatype":"string","x-order":69,"x-filterType":"TEXT"},{"name":"kokybes_kontrl_slenkstis","titles":{"lt":"Slenkstis, kuris buvo naudojamas kokybės kontrolės (QC) taisyklei „Trūkstami duomenys“ (angl. 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Mixed sites) kokybės kontrolės būsena","en":"Quality control status of “Mixed sites”"},"datatype":"string","x-order":76,"x-filterType":"CATEGORY","x-enum":[{"tag":"bad"},{"tag":"good"},{"tag":"mediocre"}]},{"name":"viso_misriu_vietu_dviprasmisku_nk","titles":{"lt":"Bendras dviprasmiškų nukleotidų skaičius, naudotų „mišrių vietų“ (angl. Mixed sites) kokybės kontrolei","en":"Total number of ambiguous nucleotides used for “Mixed sites” quality control"},"datatype":"long","x-order":77,"x-filterType":"RANGE","x-range":{"min":0.0,"max":87.0}},{"name":"kk_privacios_mutacijos_riba","titles":{"lt":"Ribinis parametras, naudojamas kokybės kontrolei unikalioms mėginiui būdingoms mutacijoms (angl. private mutations)","en":"Threshold parameter used for quality control of unique sample-specific mutations (private mutations)"},"datatype":"long","x-order":78,"x-filterType":"RANGE","x-range":{"min":24.0,"max":24.0}},{"name":"kk_privacios_mutacijos_param","titles":{"lt":"Perteklinis parametras, naudojamas kokybės kontrolei unikalioms mėginiui būdingoms mutacijoms (angl. private mutations)","en":"Redundant parameter used for quality control of unique sample-specific mutations (private mutations)"},"datatype":"long","x-order":79,"x-filterType":"RANGE","x-range":{"min":-8.0,"max":93.0}},{"name":"kk_privaciu_mutaciju_balas","titles":{"lt":"Unikalių mėginiui būdingų mutacijų (angl. private mutations) kokybės kontrolės balas","en":"Quality control score for unique sample-specific mutations (private mutations)"},"datatype":"double","x-order":80,"x-filterType":"RANGE","x-range":{"min":0.0,"max":387.5}},{"name":"kk_privaciu_mutaciju_busena","titles":{"lt":"Unikalių mėginiui būdingų mutacijų (angl. private mutations) kokybės kontrolės būsena","en":"Quality control status for unique sample-specific mutations (private mutations)"},"datatype":"string","x-order":81,"x-filterType":"CATEGORY","x-enum":[{"tag":"bad"},{"tag":"good"},{"tag":"mediocre"}]},{"name":"svertine_privaciu_mutaciju_riba","titles":{"lt":"Svertinė unikalios mėginiui būdingų mutacijų (angl. private mutations) suma, naudojama kokybės kontrolei unikalioms mėginiui būdingoms mutacijoms","en":"Weighted sum of unique sample-specific mutations (private mutations), used for quality control of unique sample-specific mutations"},"datatype":"long","x-order":82,"x-filterType":"RANGE","x-range":{"min":0.0,"max":101.0}},{"name":"kk_remelio_posl_sar","titles":{"lt":"Aptiktų rėmelių poslinkių sąrašas „Rėmelių poslinkių“ (angl. 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Only matches of at least 40 nucleotides long are considered (configurable using 'min match length' CLI flag or dataset property). This is likely due to low quality of the provided sequence, or due to using incorrect reference sequence."}]}]}}
Title translated	{'lt': 'SARS-CoV-2 viruso sekoskaitos duomenys (nextclade_ataskaita)', 'en': 'Sars-cov-2 virus sequencing data (nextclade_ataskaita)'}